Input/Output

Input/Output#

Functions for reading and writing AnnData objects optimized for seqlet analysis.

save_h5ad(adata, filename[, compression, ...])

Save AnnData object to H5AD format with proper handling of numpy arrays in .obs and .var.

load_h5ad(filename[, backed])

Load AnnData object from H5AD format with restoration of numpy arrays in .obs and .var.

save_patterns(patterns, filename)

Save dict of Patterns to disk.

load_patterns(filename)

Load patterns from disk.